PXD043997 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | High-Intensity Comparative and Quantitative Proteomics of Histamine-Forming and Other Biogenic Amine-Producing Bacteria Present in Seafood |
Description | This article describes a shotgun quantitative proteomics strategy to evaluate and compare foodborne strains of bacteria that produce biogenic amines. |
HostingRepository | PRIDE |
AnnounceDate | 2025-05-06 |
AnnouncementXML | Submission_2025-05-06_07:39:42.448.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD043997 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Mónica Carrera |
SpeciesList | scientific name: Proteus vulgaris; NCBI TaxID: 585; scientific name: Providencia rettgeri; NCBI TaxID: 587; scientific name: Proteus mirabilis BB2000; NCBI TaxID: 1266738; scientific name: Enterobacter sp. T3; NCBI TaxID: 640459; scientific name: Klebsiella pneumoniae KP-1; NCBI TaxID: 1365186; scientific name: Klebsiella oxytoca NBRC 105695; NCBI TaxID: 1218097; scientific name: Providencia stuartii; NCBI TaxID: 588; scientific name: Hafnia alvei; NCBI TaxID: 569; |
ModificationList | monohydroxylated residue |
Instrument | LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-07-21 18:19:28 | ID requested | |
⏵ 1 | 2025-05-06 07:39:43 | announced | |
Publication List
10.1021/acs.jafc.3c06607; |
Abril AG, Calo-Mata P, Villa TG, B, ö, hme K, Barros-Vel, á, zquez J, S, á, nchez-P, é, rez Á, Pazos M, Carrera M, High-Resolution Comparative and Quantitative Proteomics of Biogenic-Amine-Producing Bacteria and Virulence Factors Present in Seafood. J Agric Food Chem, 72(8):4448-4463(2024) [pubmed] |
10.6019/PXD043997; |
Keyword List
submitter keyword: Biogenic amine, bacteria, shotgun quantitative proteomics, fish, bacterial detection, LC-MS/MS |
Contact List
Monica Carrera |
contact affiliation | IIM-CSIC |
contact email | mcarrera@iim.csic.es |
lab head | |
Mónica Carrera |
contact affiliation | CSIC |
contact email | mcarrera@iim.csic.es |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD043997 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD043997
- Label: PRIDE project
- Name: High-Intensity Comparative and Quantitative Proteomics of Histamine-Forming and Other Biogenic Amine-Producing Bacteria Present in Seafood