PXD043817

PXD043817 is an original dataset announced via ProteomeXchange.

Title	Applying plexDIA analysis to newly synthesized proteome samples generated using a semi-automated enrichment protocol
Description	Samples generated with a newly development semi-automated enrichment protocol for newly synthesized proteins, using different amounts of protein input, were analysed using data-independent acquisition (DIA) and processed with the plexDIA software features of DIA-NN (https://www.nature.com/articles/s41587-022-01389-w).
HostingRepository	PRIDE
AnnounceDate	2023-10-19
AnnouncementXML	Submission_2023-10-19_00:47:05.127.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	TomanBortecen
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2023-07-16 16:02:18	ID requested
⏵ 1	2023-10-19 00:47:05	announced

Dataset with its publication pending

submitter keyword: SILAC, plexDIA, QuaNPA

Prof. JeroenKrijgsveld
contact affiliation	German Cancer Research Center (DKFZ) Heidelberg Universitz Clinic
contact email	j.krijgsveld@dkfz-heidelberg.de
lab head
TomanBortecen
contact affiliation	German Cancer Research Center (DKFZ)
contact email	toman@hotmail.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD043817

PRIDE project URI

• PRIDE
  1. PXD043817
     1. Label: PRIDE project
     2. Name: Applying plexDIA analysis to newly synthesized proteome samples generated using a semi-automated enrichment protocol