PXD043459

PXD043459 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics Analysis of the UMK2 Mutation in Arabidopsis thaliana seeds
Description	We compared the proteome of dry as well as germinating seeds of Arabidopsis thaliana wild type Col-0 with the respective proteomes from an umk2 (AT4G25280) frameshift mutant. Germinating seeds were incubated for 48 hours in 1/2-MS medium in Petri dishes at 4 degree Celsius followed by 24 hours of a phytochamber under long-day conditions. Protein extraction, digestion by SP3 workflow, and LC-IMS-MS/MS analysis as described in https://doi.org/10.1038/s41477-022-01308-6.
HostingRepository	MassIVE
AnnounceDate	2024-06-28
AnnouncementXML	Submission_2024-06-28_01:27:22.253.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nils Rugen
SpeciesList	scientific name: Arabidopsis thaliana; common name: thale cress; NCBI TaxID: 3702;
ModificationList	Acetyl; Carbamidomethyl
Instrument	timsTOF Pro

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-07-03 00:39:19	ID requested
⏵ 1	2024-06-28 01:27:22	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: Arabidopsis thaliana, Seeds, UMK2, timsTOF Pro

submitter keyword: Arabidopsis thaliana, Seeds, UMK2, timsTOF Pro

Contact List

Nils Rugen
contact affiliation	Leibniz University Hannover
contact email	rugen@genetik.uni-hannover.de
lab head
Hans-Peter Braun
contact affiliation	Plant Genetics, department plant proteomics
contact email	braun@genetik.uni-hannover.de
lab head
Nils Rugen
contact affiliation	Leibniz University Hannover
contact email	rugen@genetik.uni-hannover.de
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v06/MSV000092331/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v06/MSV000092331/