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PXD043282

PXD043282 is an original dataset announced via ProteomeXchange.

Dataset Summary
Title4D-diaXLMS: Proteome-wide Four-Dimensional Data-Independent Acquisition Workflow for Cross-linking Mass Spectrometry
DescriptionCross-linking Mass Spectrometry (XL-MS) is a powerful tool for examining protein structures and interactions. Nevertheless, anal-ysis of low-abundance cross-linked peptides is often limited in data-dependent acquisition (DDA) mode due to its semistochastic nature. To address this issue, we introduced a workflow called 4D-diaXLMS, representing the first-ever application of four-dimensional data-independent acquisition for proteome-wide cross-linking analysis.
HostingRepositoryiProX
AnnounceDate2023-06-26
AnnouncementXMLSubmission_2024-05-29_21:00:12.659.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterMoran Chen
SpeciesList scientific name: Homo sapiens; NCBI TaxID: 9606; scientific name: Saccharomyces cerevisiae; NCBI TaxID: 4932;
ModificationListNo PTMs are included in the dataset
InstrumenttimsTOF Pro
Dataset History
RevisionDatetimeStatusChangeLog Entry
02023-06-25 21:12:17ID requested
12023-08-10 21:55:40announced
22024-05-29 21:00:13announced2024-05-30: Update information.
Publication List
Hao Y, Chen M, Huang X, Xu H, Wu P, Chen S, 4D-diaXLMS: Proteome-wide Four-Dimensional Data-Independent Acquisition Workflow for Cross-Linking Mass Spectrometry. Anal Chem, 95(37):14077-14085(2023) [pubmed]
Keyword List
submitter keyword: diaPASEF, Crosslinking proteomics
Contact List
Suming Chen
contact affiliationThe Institute for Advanced Studies, Wuhan University
contact emailsm.chen@whu.edu.cn
lab head
Moran Chen
contact affiliationThe Institute for Advanced Studies, Wuhan University
contact emailmoran_chen123@qq.com
dataset submitter
Full Dataset Link List
iProX dataset URI