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PXD043180

PXD043180 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleTemperature (20-28ºC) and nutrient stress (N- and P-stress) on Synechococcus WH8102
DescriptionCultures of Synechococcus (WH8102) were grown in polycarbonate bottles with a continuous culturing method with an artificial seawater medium. The experimental design included two concentration ratios of macronutrients (NO3-:PO43- = 1.7 and 80) and 3 levels of temperature (20, 24 and 28°C). Light was supplied with white fluorescent lamps at ~125 umol quanta m-2 s-1 on a 12h:12h light:dark cycle. Cultures were stable 38 days after initiation and cells were collected on days 38, 43, 47, 50 and 57 for particulate organic matter, nutrient analysis and cellular proteins.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_06:45:43.652.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterMatthew McIlvin
SpeciesList scientific name: Bacteria; NCBI TaxID: NCBITaxon:2; scientific name: Synechococcus sp. WH 8012; NCBI TaxID: 166313;
ModificationListacetylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02023-06-21 14:54:25ID requested
12024-06-16 01:16:37announced
22024-10-22 06:45:44announced2024-10-22: Updated project metadata.
Publication List
10.1093/ismejo/wrae046;
Garcia NS, Du M, Guindani M, McIlvin MR, Moran DM, Saito MA, Martiny AC, Proteome trait regulation of marine Synechococcus elemental stoichiometry under global change. ISME J, 18(1):(2024) [pubmed]
Keyword List
submitter keyword: Synechococcus WH8102, environmental, LCMSMS
Contact List
Mak Saito
contact affiliationMarine Chemistry and Geochemistry, Woods Hole Oceanographic Institution
contact emailmsaito@whoi.edu
lab head
Matthew McIlvin
contact affiliationWoods Hole Oceanographic Inst.
contact emailmmcilvin@whoi.edu
dataset submitter
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Dataset FTP location
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PRIDE project URI
Repository Record List
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