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PXD042826

PXD042826 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleQuantitative ChIP-MS analysis of proteins associated with H3K4me1- and H3K4me3-enriched mono-nucleosomes purified from crosslinked IMR-90 cells
DescriptionHere we used ChIP-MS to quantitatively profile chromatin-associated proteins that are specifically associated with H3K4me1- and H3K4me3-modified nucleosomes in IMR-90 chromatin.
HostingRepositoryPRIDE
AnnounceDate2024-04-29
AnnouncementXMLSubmission_2024-04-29_08:01:48.833.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterAndrey Tvardovskiy
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive HF
Dataset History
RevisionDatetimeStatusChangeLog Entry
02023-06-08 10:13:49ID requested
12023-12-10 12:20:11announced
22024-04-29 08:01:49announced2024-04-29: Updated project metadata.
Publication List
Lukauskas S, Tvardovskiy A, Nguyen NV, Stadler M, Faull P, Ravnsborg T, Ö, zdemir Aygenli B, Dornauer S, Flynn H, Lindeboom RGH, Barth TK, Brockers K, Hauck SM, Vermeulen M, Snijders AP, M, ü, ller CL, DiMaggio PA, Jensen ON, Schneider R, Bartke T, Decoding chromatin states by proteomic profiling of nucleosome readers. Nature, 627(8004):671-679(2024) [pubmed]
10.1038/s41586-024-07141-5;
Keyword List
submitter keyword: H3K4me3,H3K4me1, ChIP-MS
Contact List
Till Bartke
contact affiliationInstitute of Functional Epigenetics, Helmholtz Zentrum München, 85764 Neuherberg, Germany
contact emailtill.bartke@helmholtz-muenchen.de
lab head
Andrey Tvardovskiy
contact affiliationInstitute of Functional Epigenetics, Helmholtz Zentrum München, 85764 Neuherberg, Germany
contact emailtvardovsky.a@gmail.com
dataset submitter
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Dataset FTP location
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PRIDE project URI
Repository Record List
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