PXD042252 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Multiplexed Quantitative Analyses Using Data-Dependent Acquisition Without Dynamic Exclusion for trace sample analysis |
Description | In this project, we applied our recently developed turboDDA method in the analysis of low amount of sample and iTRAQ labeled trace sample. Compared with standard data-ependent acquisition approach with dynamic exclusion, we detected improvment in spectral purity and quantification accuracy. |
HostingRepository | PRIDE |
AnnounceDate | 2024-01-26 |
AnnouncementXML | Submission_2024-01-26_09:35:00.927.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Ci Wu |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932; |
ModificationList | iTRAQ8plex-116 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-05-16 02:28:02 | ID requested | |
⏵ 1 | 2024-01-26 09:35:02 | announced | |
Publication List
10.1021/acs.analchem.3c03357; |
Wu C, Lei J, Meng F, Wang X, Wong CJ, Peng J, Lin G, Gingras AC, Ma J, Zhang S, Trace Sample Proteome Quantification by Data-Dependent Acquisition without Dynamic Exclusion. Anal Chem, 95(49):17981-17987(2023) [pubmed] |
Keyword List
submitter keyword: turboDDA, iTRAQ |
Contact List
Shen Zhang |
contact affiliation | Clinical Reaseach center for Reproduction and Genetics in Hunan Province, Reproductive and Genetic Hospital of CITIC-XIANGYA, Changsha, Hunan, China |
contact email | szhang231@126.com |
lab head | |
Ci Wu |
contact affiliation | Research specialist |
contact email | wuci1111@126.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD042252 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD042252
- Label: PRIDE project
- Name: Multiplexed Quantitative Analyses Using Data-Dependent Acquisition Without Dynamic Exclusion for trace sample analysis