PXD042003
PXD042003 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | Human plasma LC-MS/MS from children with bacterial and viral infections |
Description | LC-MS/MS proteomic profiling was performed on children with bacterial and viral infections using plasma samples. Protein biomarkers indiciative of bacterial or viral infection were identified. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_09:14:30.034.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Heather Jackson |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2023-05-05 00:52:44 | ID requested | |
1 | 2023-11-14 03:18:35 | announced | |
⏵ 2 | 2023-11-14 09:14:31 | announced | 2023-11-14: Updated project metadata. |
Publication List
Jackson HR, Zandstra J, Menikou S, Hamilton MS, McArdle AJ, Fischer R, Thorne AM, Huang H, Tanck MW, Jansen MH, De T, Agyeman PKA, Von Both U, Carrol ED, Emonts M, Eleftheriou I, Van der Flier M, Fink C, Gloerich J, De Groot R, Moll HA, Pokorn M, Pollard AJ, Schlapbach LJ, Tsolia MN, Usuf E, Wright VJ, Yeung S, Zavadska D, Zenz W, Coin LJM, Casals-Pascual C, Cunnington AJ, Martinon-Torres F, Herberg JA, de Jonge MI, Levin M, Kuijpers TW, Kaforou M, Jackson HR, Zandstra J, Menikou S, Hamilton S, McArdle AJ, De T, Agyeman PKA, Von Both U, Carrol ED, Emonts M, Eleftheriou I, Van der Flier M, Fink C, De Groot R, Moll HA, Pokorn M, Pollard A, Schlapbach LJ, Tsolia M, Usuf E, Wright V, Yeung S, Zavadska D, Zenz W, Coin LJ, Cunnington AJ, Martinon-Torres F, Herberg J, De Jonge MI, Levin M, Kuijpers T, Kaforou M, Abdulla A, Aebi C, Agbeko R, Ali L, Alkema W, Allen K, Anderson S, Ansari I, Arif T, Avramoska T, Baas B, Bahovec N, Balode A, B, ã, rdzdina A, Barendregt AM, Barral-Arca R, Bath D, Bauchinger S, Baumard L, Baumgart H, Baxter F, Bell K, Bell A, Bello X, Bellos E, Benesch M, Bennet J, Berger C, Bernhard-Stirnemann S, Bibi S, Bidlingmaier C, Binder A, Binder V, Blackmore J, Bojang K, Borensztajn DM, Brengel-Pesce K, Broderick C, Buschbeck J, Calvo-Bado L, Carnota S, Carter MJ, Castro MB, Cebey-L, ó, pez M, Ceesay S, Ceolotto A, Chan A, Cocklin E, Collings K, Crulley S, Curras-Tuala MJ, D'alessandro U, D'Souza G, Danhauser K, Darboe S, Darnell S, De Haan L, De Vries G, Deksne D, Devine K, Dewez JE, Dik W, Dudley J, Eber E, Fabian D, Farto CB, Fern, á, ndez SS, Fidler K, Fitchett E, Galassini R, Gallisti S, Garc, í, a MB, Gardovska D, Geissler J, Gerrits GPJM, Giannoni E, Gloerich J, G, ó, mez-Carballa A, Gonz, á, lez F Á, Gores G, Gr, ã, vele D, Griese M, Grope I, Gurung M, Haas N, Habgood-Coote D, Hagedoorn NN, Haidl H, Harrison R, Hauer A, Heidema J, Heininger U, Henriet S, Hibberd M, Hoggart C, H, ö, sele S, Hourmat S, Hude C, Huijnen M, Iglesias PL, Iglesias MV, Jennings R, Johnson J, Jongerius I, Jorgensen R, Kahlert C, Kandasamy R, Kappler M, Keldorfer M, Kelly DF, Khanijau A, Kim N, Kim E, King S, Kolberg L, Kolnik M, Kloosterhuis L, Kohlf, ü, rst DS, Kohlmaier B, Krenn L, Leigh S, Leitner M, Leurent B, Lim E, Lin N, Liu CC, L, ö, ffler S, Lurz E, Mackerness C, Maconochie I, Mallet F, Marmarinos A, Martin A, Martin M, Martin, ó, n S, á, nchez JM, Martin, ó, n-Torres N, McAlinden P, McDonald S, McDonell A, Meiere A, Meierford A, Miedema CJ, Miners A, Mistry R, Mommert M, Morris S, Muench G, Murdoch DR, Mustafa S, Natalucci G, Neeleman C, Newall K, Nichols S, Niederer-Loher A, Niedrist T, Nijman R, Nokalna I, Nordberg G, O'Connor D, Obihara CC, Oliver Z, Oosthoek W, Ora MS, Osterman V, Pachot A, Pajkrt D, Pardo-Seco J, Pav, ã, re J, Paz IP, Paulus S, P, é, rez BM, Persand S, Pfleger A, Pfurtscheller K, Philipsen R, Pickering A, Pierce B, Pilch H, Pischedda S, P, ö, lz L, Posfay-Barbe KM, Powell O, Prunk P, Pu, č, uka Z, Rajic G, Rashid A, Redondo-Collazo L, Reiter K, Relly C, Rhodes M, Rial JG, Richmond V, Riedel T, Rivero Calle I, Roca A, R, ö, dl S, Rodr, í, guez LP, Rodr, í, guez-Tenreiro C, Romaine S, Rowlands E, Rudzate A, Sagmeister M, Saidykhan M, Sallas A, Sarr I, Schoen C, Schonenberg D, Schweintzger N, Secka F, Selecka K, Shah P, Shen CF, Shrestha S, Skrabl-Baumgartner A, Soon J, Sperl M, Sprenkeler E, Spyridis N, Srovin TP, Stampfer L, Stevens M, Stocker M, Strenger V, Su, á, rez CD, Svile D, Syggelou K, Tal C, Tambouratzi M, Tavliavini E, Thakker C, Thomson E, Throson S, Till H, Tramper-Stranders GA, Trasorras CS, Trobisch A, Urb, ã, ne UN, Usman M, Valentine L, Van Aerde K, Van den Berg JM, Van den Broek B, Van der Giessen I, Van der Kuip M, Van der Velden F, Van Furth AM, Van Gool AJ, Van Leur M, van Mierlo G, V, á, zquez SR, Vermont C, Vicente LG, Vincek K, Vito O, Voice M, Wallia D, Walsh B, Wang SM, Wedderburn C, Willems E, Wilson C, Wood A, Woodsford P, Wyss V, Xagorari M, Zachariasse J, Zaman SMA, Zurl C, Zwerenz M, A multi-platform approach to identify a blood-based host protein signature for distinguishing between bacterial and viral infections in febrile children (PERFORM): a multi-cohort machine learning study. Lancet Digit Health, 5(11):e774-e785(2023) [pubmed] |
Keyword List
submitter keyword: LC-MS/MS, human, plasma |
Contact List
Myrsini Kaforou | |
---|---|
contact affiliation | Section of Paediatric Infectious Diseases, Faculty of Medicine, Imperial College London, UK |
contact email | m.kaforou@imperial.ac.uk |
lab head | |
Heather Jackson | |
contact affiliation | Imperial College London |
contact email | heather.jackson17@imperial.ac.uk |
dataset submitter |
Full Dataset Link List
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/11/PXD042003 |
PRIDE project URI |
Repository Record List
[ + ]