PXD041980

PXD041980 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	IEX fractionated proteome of pig tracheal cilia extract
Description	Cilia from two fresh pig tracheas (Sus scrofa) were removed by calcium shock and proteins extracted in buffer containing 1% NP40. Extract was diluted to reduce salts and fractionated by HPLC on a mixed bed ion exchange column. Fractions were reduced/alkylated and digested with trypsin for analysis by LC-MS/MS on an orbitrap fusion Lumos using a 75 minute top speed DDA method and HCD.
HostingRepository	MassIVE
AnnounceDate	2024-03-06
AnnouncementXML	Submission_2024-03-06_11:03:04.208.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Ophelia Papoulas
SpeciesList	scientific name: Sus scrofa; common name: pig; NCBI TaxID: 9823;
ModificationList	Carbamidomethyl
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-05-04 06:54:51	ID requested
⏵ 1	2024-03-06 11:03:04	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: pig, sus scrofa, trachea, cilia, LECA, IEX, orbitrap fusion Lumos

submitter keyword: pig, sus scrofa, trachea, cilia, LECA, IEX, orbitrap fusion Lumos

Contact List

Edward Marcotte
contact affiliation	University of Texas-Austin
contact email	marcotte@icmb.utexas.edu
lab head
Ophelia Papoulas
contact affiliation	University of Texas at Austin
contact email	papoulas@austin.utexas.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v05/MSV000091856/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v05/MSV000091856/