PXD041832

PXD041832 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Arabidopsis thaliana PTM dynamics during dark-light transition
Description	Two proteomics DDA experiments investigating dynamics of post-translational modifications in Arabidopsis thaliana whole leaf rosettes at multiple harvest times around dark to light transition. One experiment regarding acetylation (K) and phosphorylation (STY) after serial enrichment of dimethyl labelled samples. The second experiment regarding oxidation status of reversibly oxidized cysteins using differential iodoTMTsixplex labelling reagent and following TMT-antibody enrichment.
HostingRepository	jPOST
AnnounceDate	2023-07-21
AnnouncementXML	Submission_2023-08-01_08:38:41.225.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jonas Giese
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	unknown modification; alpha-amino acetylated residue; L-methionine sulfoxide; S-carboxamidomethyl-L-cysteine; N6,N6-dimethyl-L-lysine; alpha-amino dimethylated residue; O-phospho-L-serine; O-phospho-L-threonine; O4'-phospho-L-tyrosine; N6-acetyl-L-lysine
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-04-26 09:59:47	ID requested
1	2023-07-21 03:16:46	announced
⏵ 2	2023-08-01 08:38:42	announced	2023-08-02: Updated PubMed.

Publication List

Giese J, Eirich J, Walther D, Zhang Y, Lassowskat I, Fernie AR, Els, ä, sser M, Maurino VG, Schwarzl, ä, nder M, Finkemeier I, The interplay of post-translational protein modifications in Arabidopsis leaves during photosynthesis induction. Plant J, 116(4):1172-1193(2023) [pubmed]

Giese J, Eirich J, Walther D, Zhang Y, Lassowskat I, Fernie AR, Els, ä, sser M, Maurino VG, Schwarzl, ä, nder M, Finkemeier I, The interplay of post-translational protein modifications in Arabidopsis leaves during photosynthesis induction. Plant J, 116(4):1172-1193(2023) [pubmed]

Keyword List

submitter keyword: PTM, iodoTMT, acetylation, phosphorylation, reversible cystein oxidation, immunoprecipitation

submitter keyword: PTM, iodoTMT, acetylation, phosphorylation, reversible cystein oxidation, immunoprecipitation

Contact List

Iris Finkemeier
lab head
Jonas Giese
contact affiliation	Plant Physiology, WWU Muenster
dataset submitter

Full Dataset Link List

jPOST dataset URI
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jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001130/