PXD041830
PXD041830 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Silveira_CYP26B1_BioID_P124_6600 |
| Description | Dataset description This dataset consists of 8 raw MS files and associated peak lists and results files, acquired on AB Sciex TripleTOF 6600 mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Ema Dreseris. BioID and Mass spectrometry acquisition was performed by Cassandra Wong. Analysis was performed by Cassandra Wong, Ema Dreseris, Anne-Claude Gingras and Eric Campos. The files are associated with a manuscript submitted for publication by Karina Silveria et al. The main goal of this paper was to investigate CYP26B1 pathogenic variants reported by two families. This dataset comprehensively maps the interactome of CYP26B1 and the associated pathogenic variants using proximity labeling and affinity purification. Peter Kannu is the corresponding author of the manuscript (kannu@ualberta.ca); Anne-Claude Gingras should be contacted for questions on this dataset (gingras@lunenfeld.ca) This submission is associated with 3 Supplementary Files (in addition to this README file) Table 1 describes the composition of this dataset Table 2 lists all the peptide identification evidence (as per iProphet) Table 3 lists the SAINTexpress interactions |
| HostingRepository | MassIVE |
| AnnounceDate | 2023-09-22 |
| AnnouncementXML | Submission_2023-09-22_09:24:02.734.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Gingras Lab |
| SpeciesList | scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; |
| ModificationList | deamidated L-asparagine; deamidated L-glutamine; L-methionine sulfoxide |
| Instrument | TripleTOF 6600 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2023-04-26 09:17:56 | ID requested | |
| ⏵ 1 | 2023-09-22 09:24:03 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: CYP26B1, BioID, Skeletal Dysplasia |
Contact List
| Anne-Claude Gingras | |
|---|---|
| contact affiliation | LTRI |
| contact email | gingras@lunenfeld.ca |
| lab head | |
| Gingras Lab | |
| contact affiliation | Samuel Lunenfeld Research Institute |
| contact email | gingras@mshri.on.ca |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000091800/ |
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