PXD041792 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | BioID screening experiment to map proteins linked to PHYHD1 |
Description | PHYHD1 is a 2-oxoglutarate-dependent dioxygenase. To shed light on the cellular function of human PHYHD1, we performed a BioID screening experiment to map proteins linked to PHYHD1 functionally. For that, we used HEK293T cells transiently expressing either BirA* or BirA*-tagged PHYHD1 in the absence or presence of biotin. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_09:00:03.952.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Elitsa Dimova |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | biotinylated residue; acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-04-25 00:59:10 | ID requested | |
1 | 2023-05-27 13:16:50 | announced | |
⏵ 2 | 2023-11-14 09:00:04 | announced | 2023-11-14: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: HEK293T, BioID, PHYHD1 |
Contact List
Prof. Peppi Karppinen |
contact affiliation | University of Oulu Faculty of Biochemistry and Molecular Medicine Oulu, Finland |
contact email | peppi.karppinen@oulu.fi |
lab head | |
Elitsa Dimova |
contact affiliation | Faculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland |
contact email | elitsa.dimova@oulu.fi |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD041792 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD041792
- Label: PRIDE project
- Name: BioID screening experiment to map proteins linked to PHYHD1