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PXD041792

PXD041792 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleBioID screening experiment to map proteins linked to PHYHD1
DescriptionPHYHD1 is a 2-oxoglutarate-dependent dioxygenase. To shed light on the cellular function of human PHYHD1, we performed a BioID screening experiment to map proteins linked to PHYHD1 functionally. For that, we used HEK293T cells transiently expressing either BirA* or BirA*-tagged PHYHD1 in the absence or presence of biotin.
HostingRepositoryPRIDE
AnnounceDate2023-11-14
AnnouncementXMLSubmission_2023-11-14_09:00:03.952.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterElitsa Dimova
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListbiotinylated residue; acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive HF
Dataset History
RevisionDatetimeStatusChangeLog Entry
02023-04-25 00:59:10ID requested
12023-05-27 13:16:50announced
22023-11-14 09:00:04announced2023-11-14: Updated project metadata.
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: HEK293T, BioID, PHYHD1
Contact List
Prof. Peppi Karppinen
contact affiliationUniversity of Oulu Faculty of Biochemistry and Molecular Medicine Oulu, Finland
contact emailpeppi.karppinen@oulu.fi
lab head
Elitsa Dimova
contact affiliationFaculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland
contact emailelitsa.dimova@oulu.fi
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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