PXD041627

PXD041627 is an original dataset announced via ProteomeXchange.

Title	MOI analysis of purslane responses to salinity stress - leaf
Description	This project constructed a multiomics (proteome, metabolome, and transcriptome) database on the response of purslane (Portulaca oleracea L.) plants to salt stress and subsequently started to employ Single-omics (SOA) and Multi-omics Integration (MOI) strategies to characterize the molecular basis of the resistance to salinity stress found in this halophyte species. After evaluating the morpho-physiological responses of purslane plants to salinity stress using a robust salinity stress protocol developed in-house, leaves, and roots were used to generate the database. The proteome data from five plants (control and salt-stressed - leaf and root) was generated and then submitted to the MaxQuant software version 2.1.3.0 for protein identification and abundance, generating a .txt file named “proteinsgroups” that underwent statistical analysis in Perseus software version 2.0.5.0. Here the data and results of the proteome part of the project are presented. For additional information, please read: Silva, V. N. B., da Silva, T. L. C., Ferreira, T. M. M., Neto, J. C. R., Leão, A. P., de Aquino Ribeiro, J. A., Abdelnur, P. V., Valadares, L. F., de Sousa, C. A. F., & Júnior, M. T. S. (2022). Multi-omics Analysis of Young Portulaca oleracea L. Plants' Responses to High NaCl Doses Reveals Insights into Pathways and Genes Responsive to Salinity Stress in this Halophyte Species. Phenomics (Cham, Switzerland), 3(1), 1–21. https://doi.org/10.1007/s43657-022-00061-2
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_06:39:25.571.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD041627
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Manoel Teixeira Souza Júnior
SpeciesList	scientific name: Portulaca oleracea; NCBI TaxID: 46147;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2023-04-18 10:52:27	ID requested
1	2023-06-01 06:29:48	announced
⏵ 2	2023-11-14 06:39:25	announced	2023-11-14: Updated project metadata.

10.6019/PXD041627;

ProteomeXchange project tag: Food and Nutrition (B/D-HPP), Bioinformatics Infrastructure for Life Sciences (BILS) network (Sweden)

submitter keyword: Portulaca oleracea, Salinity stress,Mult Omics Integration

Manoel Teixeira Souza Junior
contact affiliation	Phytopathology / Molecular Biology of Plants; Researcher A at Embrapa Agroenergia - Brazilian Agricultural Research Corporation (Embrapa); Brazil - Brasilia - DF.
contact email	manoel.souza@embrapa.br
lab head
Manoel Teixeira Souza Júnior
contact affiliation	Embrapa
contact email	manoel.souza@embrapa.br
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/06/PXD041627

PRIDE project URI

• PRIDE
  1. PXD041627
     1. Label: PRIDE project
     2. Name: MOI analysis of purslane responses to salinity stress - leaf