PXD041381

PXD041381 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Mouse liver sinusoidal endothelial cell responses to the glucocorticoid receptor agonist dexamethasone
Description	Liver sinusoidal endothelial cells (LSECs) from C57Bl/6J male mice obtained from Charles River Laboratory (Sulzfeld, Germany) were cultured on fibronectin coated plates in 5% oxygen atmosphere in AIM-V with serum-free supplements for 1h, 10h, or 48h. Data from quantitative proteomics using a tandem mass tag (TMT)6-plex strategy on an Orbitrap Fusion Lumos mass spectrometer (Thermo Fisher Scientific)), using a TMT SPS MS3 method (Navarrete-Perea, Yu et al. 2018).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:59:43.520.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sabin Bhandari
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-04-06 08:11:08	ID requested
1	2024-09-25 11:13:08	announced
⏵ 2	2024-10-22 06:59:43	announced	2024-10-22: Updated project metadata.

Publication List

10.3389/FPHAR.2024.1377136;

10.3389/FPHAR.2024.1377136;

Keyword List

submitter keyword: Mus musculus, TMT SPS MS3 method, Orbitrap Fusion Lumos mass spectrometer

submitter keyword: Mus musculus, TMT SPS MS3 method, Orbitrap Fusion Lumos mass spectrometer

Contact List

Karen Kristine
contact affiliation	Department of Medical Biology, Faculty of Health Sciences, UiT The Arctic University of Norway, Tromsø, Norway
contact email	karen.sorensen@uit.no
lab head
Sabin Bhandari
contact affiliation	UiT
contact email	sabin.bhandari@uit.no
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/09/PXD041381
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/09/PXD041381

PRIDE project URI

Repository Record List

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