PXD041282

PXD041282 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Spike Glycoprotein S1 Site-specific O-glycosylation: Systematic and Comparative Analysis from Eleven Variants of SARS CoV-2
Description	In this study, we provide a comprehensive characterization of O-glycosylation in eleven variants of SARS-CoV-2 S1 subunit recombinantly expressed in HEK293 cells.
HostingRepository	PRIDE
AnnounceDate	2024-01-26
AnnouncementXML	Submission_2024-01-26_08:10:53.947.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD041282
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	SHERIFDEEN ONIGBINDE
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-04-02 12:23:19	ID requested
⏵ 1	2024-01-26 08:10:55	announced

Publication List

Onigbinde S, Reyes CDG, Fowowe M, Daramola O, Atashi M, Bennett AI, Mechref Y, -Glycosylation Patterns Influence Viral Pathogenicity, Infectivity, and Transmissibility in SARS-CoV-2 Variants. Biomolecules, 13(10):(2023) [pubmed]
10.6019/PXD041282;
10.3390/biom13101467;

Onigbinde S, Reyes CDG, Fowowe M, Daramola O, Atashi M, Bennett AI, Mechref Y, -Glycosylation Patterns Influence Viral Pathogenicity, Infectivity, and Transmissibility in SARS-CoV-2 Variants. Biomolecules, 13(10):(2023) [pubmed]

10.6019/PXD041282;

10.3390/biom13101467;

Keyword List

submitter keyword: Mutations,SARS-CoV-2, O-glycosylation, HCD-EThCD, LC-MS/MS

submitter keyword: Mutations,SARS-CoV-2, O-glycosylation, HCD-EThCD, LC-MS/MS

Contact List

Yehia Mechref
contact affiliation	Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas.
contact email	Yehia.Mechref@ttu.edu
lab head
SHERIFDEEN ONIGBINDE
contact affiliation	Texas Tech University
contact email	sonigbin@ttu.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD041282
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD041282

PRIDE project URI

Repository Record List

[ + ]