⮝ Full datasets listing
PXD041108
PXD041108 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Global discovery of synapse proteins using multi-omic synaptic signatures |
| Description | Bottom-up proteomics analysis of whole cell lysate and synaptosomes extracted from wild type and Cul3-haploinsufficient mouse cortex |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-03-09 |
| AnnouncementXML | Submission_2026-03-08_19:25:23.474.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Justin McKetney |
| SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: NEWT:10090; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Orbitrap Exploris 480 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2023-03-25 22:15:39 | ID requested | |
| ⏵ 1 | 2026-03-08 19:25:24 | announced |
Publication List
| 10.1016/j.cels.2025.101204; |
| Mei Y, Gosztyla ML, Tan X, Dozier LE, Wilkinson B, McKetney J, Lee J, Chen M, Tsai D, Kopalle H, Gritsenko MA, Hartel N, Graham NA, Flores I, Gilmore-Hall SK, Xu S, Marquez CA, Liu SN, Fong D, Chen J, Licon K, Hong D, Wright SN, Kreisberg JF, Nott A, Smith RD, Qian WJ, Swaney DL, Iakoucheva LM, Krogan NJ, Patrick GN, Zhou Y, Feng G, Coba MP, Yeo GW, Ideker T, Integrated multi-omic characterizations of the synapse reveal RNA processing factors and ubiquitin ligases associated with neurodevelopmental disorders. Cell Syst, 16(4):101204(2025) [pubmed] |
Keyword List
| submitter keyword: synaptosome,LC-MSMS |
Contact List
| Nevan J Krogan | |
|---|---|
| contact affiliation | QBI Director and Professor in Cellular and Molecular Pharmacology, UCSF |
| contact email | nevan.krogan@ucsf.edu |
| lab head | |
| Justin McKetney | |
| contact affiliation | University of California, San Francisco |
| contact email | justinmcketney@gmail.com |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/03/PXD041108 |
| PRIDE project URI |
Repository Record List
[ + ]
