PXD041035

PXD041035 is an original dataset announced via ProteomeXchange.

Title	Identification and characterization of CC-AMP1-like and CC-AMP2-like peptides in Capsicum spp.
Description	Antimicrobial peptides (AMPs) are compounds with a variety of bioactive properties. Especially promising are their antibacterial activities, often towards drug-resistant pathogens. Across different AMP sources, AMPs expressed within plants are relatively underexplored, with a limited number of plant AMP families identified. Recently, we identified the novel AMPs CC-AMP1 and CC-AMP2 in ghost pepper plants (Capsicum chinense x frutescens), exerting promising antibacterial activity and not classifying into any known plant AMP family. Herein, AMPs related to CC-AMP1 and CC-AMP2 were identified within both Capsicum annuum and Capsicum baccatum. Targeted MS/MS experiments were performed to determine peptide sequences, guided by in silico AMP sequence predictions.
HostingRepository	PRIDE
AnnounceDate	2024-01-27
AnnouncementXML	Submission_2024-01-27_12:42:05.485.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Leslie Hicks
SpeciesList	scientific name: Capsicum annuum; NCBI TaxID: 4072; scientific name: Capsicum baccatum; NCBI TaxID: 33114;
ModificationList	2-pyrrolidone-5-carboxylic acid; iodoacetamide derivatized residue
Instrument	TripleTOF 5600; Q Exactive HF-X

Revision	Datetime	Status	ChangeLog Entry
0	2023-03-22 14:34:55	ID requested
⏵ 1	2024-01-27 12:42:05	announced

Dataset with its publication pending

submitter keyword: Capsicum annuum,Mass Spectrometry, Capsicum baccatum, antimicrobial peptides

Leslie M. Hicks
contact affiliation	Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States
contact email	lmhicks@email.unc.edu
lab head
Leslie Hicks
contact affiliation	University of North Carolina at Chapel Hill
contact email	lmhicks@unc.edu
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD041035
     1. Label: PRIDE project
     2. Name: Identification and characterization of CC-AMP1-like and CC-AMP2-like peptides in Capsicum spp.