PXD040688
PXD040688 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | iBAQ Quantification of the Caulerpa prolifera Proteome |
Description | MaxQuant 2.1.3.0 iBAQ analysis of triplicate Caulerpa prolifera samples. Whole algae samples were frozen, ground, extracted with acetone and phenol, recovered by precipitation, and solubilized for SDS-PAGE. For each of the triplicate samples the gel lane was cut into 12 gel slices and prepared by in-gel trypsin digest for mass spectrometry on an Orbitrap Fusion Lumos mass spectrometer. Data were collected using an LC/MS-MS DDA method with a 60 min gradient and stepped HCD. |
HostingRepository | MassIVE |
AnnounceDate | 2023-11-29 |
AnnouncementXML | Submission_2023-11-29_11:28:39.402.xml |
DigitalObjectIdentifier | |
ReviewLevel | Non peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Ophelia Papoulas |
SpeciesList | scientific name: Caulerpa prolifera; NCBI TaxID: 76314; |
ModificationList | Carbamidomethyl |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2023-03-08 09:44:12 | ID requested | |
⏵ 1 | 2023-11-29 11:28:39 | announced |
Publication List
no publication |
Keyword List
submitter keyword: iBAQ, Caulerpa prolifera, algae, macroalgae, siphonous, gel |
Contact List
Edward Marcotte | |
---|---|
contact affiliation | University of Texas-Austin |
contact email | marcotte@icmb.utexas.edu |
lab head | |
Ophelia Papoulas | |
contact affiliation | University of Texas at Austin |
contact email | papoulas@austin.utexas.edu |
dataset submitter |
Full Dataset Link List
MassIVE dataset URI |
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000091436/ |