PXD040684

PXD040684 is an original dataset announced via ProteomeXchange.

Title	Effects of PRSS35 on the extra cellular matrix
Description	In the project four sets of label-free proteomics studies were performed to characterize the extra cellular matrix (ECM) proteome of differentially treated cells (see below). All cells were treated with sorbitol to induce the expression of PRSS35. Only in set IV PRSS35 is downregulated. For each set, three biological replicates were performed, which were each fractionated by SDS-PAGE into five fractions. Proteins were in-gel digested with trypsin and analyzed by DDA on an Exploris 480 mass spectrometer:
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:57:40.076.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD040684
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Joern Dengjel
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2023-03-08 02:51:42	ID requested
1	2023-07-25 11:24:27	announced
⏵ 2	2024-10-22 05:57:40	announced	2024-10-22: Updated project metadata.

10.6019/PXD040684;

submitter keyword: Human, ECM, LC-MSMS, skin, fibroblast

Joern Dengjel
contact affiliation	Dept. of Biology University of Fribourg Chemin du Musee 10 CH-1700 Fribourg Switzerland
contact email	joern.dengjel@unifr.ch
lab head
Joern Dengjel
contact affiliation	University of Fribourg
contact email	joern.dengjel@medizin.uni-freiburg.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD040684

PRIDE project URI

• PRIDE
  1. PXD040684
     1. Label: PRIDE project
     2. Name: Effects of PRSS35 on the extra cellular matrix