PXD040444

PXD040444 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Genetically modified ID8 cells to study the role of GBP1 in ovarian cancer
Description	Genetically modified ovarian cancer cells were used to study the role of GBP1. Proteomics-based thermal stability assay (CETSA) was performed on GBP1 knockdown and overexpressing ID8 ovarian cancer cells. Shotgun proteomics was also performed on these cells.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:26:25.684.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sharon Pitteri
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Eclipse; LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-02-27 06:06:21	ID requested
1	2024-01-26 07:44:02	announced
⏵ 2	2024-10-22 06:26:26	announced	2024-10-22: Updated project metadata.

Publication List

Tailor D, Garcia-Marques FJ, Bermudez A, Pitteri SJ, Malhotra SV, Guanylate-binding protein 1 modulates proteasomal machinery in ovarian cancer. iScience, 26(11):108292(2023) [pubmed]
10.1016/j.isci.2023.108292;

Tailor D, Garcia-Marques FJ, Bermudez A, Pitteri SJ, Malhotra SV, Guanylate-binding protein 1 modulates proteasomal machinery in ovarian cancer. iScience, 26(11):108292(2023) [pubmed]

10.1016/j.isci.2023.108292;

Keyword List

submitter keyword: ovarian cancer, knockdown, overexpression, CETSA,GBP1

submitter keyword: ovarian cancer, knockdown, overexpression, CETSA,GBP1

Contact List

Sharon Pitteri
contact affiliation	Department of Radiology Canary Center at Stanford for Cancer Early Detection School of Medicine Stanford University
contact email	spitteri@stanford.edu
lab head
Sharon Pitteri
contact affiliation	Stanford University
contact email	spitteri@stanford.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD040444
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD040444

PRIDE project URI

Repository Record List

[ + ]