PXD040352

PXD040352 is an original dataset announced via ProteomeXchange.

Title	Functional characterisation of nematode spliced leader 1 trans-splicing factors SUT-1, SNA-2, SNA-3 and SNR-2 by immunoprecipitation and LC-MS/MS.
Description	Spliced leader trans-splicing is an essential RNA processing step that is required for the formation of mRNA in many eukaryotes, including C. elegans. However, the role of factors involved in this reaction is not well known. Here we further characterise the function of SNA-2, SNA-3, SUT-1 and SNR-2 involved in spliced leader 1 trans-splicing through identification of interacting proteins by immunoprecipitation followed by LC-MS/MS and label-free quantification.
HostingRepository	PRIDE
AnnounceDate	2024-04-23
AnnouncementXML	Submission_2024-04-23_07:49:21.990.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Berndt Muller
SpeciesList	scientific name: Caenorhabditis elegans; NCBI TaxID: 6239;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2023-02-23 03:50:03	ID requested
⏵ 1	2024-04-23 07:49:22	announced

10.1093/NAR/GKAE321;

submitter keyword: small nuclear ribonucleoproteins,RNA processing, Caenorhabditis elegans

Berndt Muller
contact affiliation	University of Aberdeen School of Medicine, Medical Sciences and Nutrition Institute of Medical Sciences, Foresterhill Aberdeen AB25 2ZD Scotland, United Kingdom
contact email	b.mueller@abdn.ac.uk
lab head
Berndt Muller
contact affiliation	University of Aberdeen
contact email	b.mueller@abdn.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/04/PXD040352

PRIDE project URI

• PRIDE
  1. PXD040352
     1. Label: PRIDE project
     2. Name: Functional characterisation of nematode spliced leader 1 trans-splicing factors SUT-1, SNA-2, SNA-3 and SNR-2 by immunoprecipitation and LC-MS/MS.