PXD040349 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Integrative multi-omics investigation of microbes responsible for methne emission from cows fed either an ad lib or restricted diet |
Description | Multi-omics integration analysis of rumen microorganisms isolated from cows fed either an ad lib or restricted diet, and comparing this with methane emission rates for the cows. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_09:03:44.387.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Magnus Arntzen |
SpeciesList | scientific name: bovine metagenome; NCBI TaxID: 1218275; scientific name: Bos taurus (Bovine); NCBI TaxID: 9913; scientific name: microbial eukaryotic metagenome; NCBI TaxID: 2713252; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-02-23 03:49:00 | ID requested | |
1 | 2023-07-20 11:56:54 | announced | |
⏵ 2 | 2023-11-14 09:03:48 | announced | 2023-11-14: Updated project metadata. |
Publication List
Andersen TO, Altshuler I, Vera-Ponce de Le, ó, n A, Walter JM, McGovern E, Keogh K, Martin C, Bernard L, Morgavi DP, Park T, Li Z, Jiang Y, Firkins JL, Yu Z, Hvidsten TR, Waters SM, Popova M, Arntzen M Ø, Hagen LH, Pope PB, Metabolic influence of core ciliates within the rumen microbiome. ISME J, 17(7):1128-1140(2023) [pubmed] |
Keyword List
submitter keyword: TEAGASC, metagenomics, metaproteomics |
Contact List
Phil Byron Pope |
contact affiliation | Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway |
contact email | phil.pope@nmbu.no |
lab head | |
Magnus Arntzen |
contact affiliation | Norwegian University of Life Sciences |
contact email | magnus.arntzen@nmbu.no |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD040349 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD040349
- Label: PRIDE project
- Name: Integrative multi-omics investigation of microbes responsible for methne emission from cows fed either an ad lib or restricted diet