PXD040349

PXD040349 is an original dataset announced via ProteomeXchange.

Title	Integrative multi-omics investigation of microbes responsible for methne emission from cows fed either an ad lib or restricted diet
Description	Multi-omics integration analysis of rumen microorganisms isolated from cows fed either an ad lib or restricted diet, and comparing this with methane emission rates for the cows.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:03:44.387.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Magnus Arntzen
SpeciesList	scientific name: bovine metagenome; NCBI TaxID: 1218275; scientific name: Bos taurus (Bovine); NCBI TaxID: 9913; scientific name: microbial eukaryotic metagenome; NCBI TaxID: 2713252;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2023-02-23 03:49:00	ID requested
1	2023-07-20 11:56:54	announced
⏵ 2	2023-11-14 09:03:48	announced	2023-11-14: Updated project metadata.

Andersen TO, Altshuler I, Vera-Ponce de Le, ó, n A, Walter JM, McGovern E, Keogh K, Martin C, Bernard L, Morgavi DP, Park T, Li Z, Jiang Y, Firkins JL, Yu Z, Hvidsten TR, Waters SM, Popova M, Arntzen M Ø, Hagen LH, Pope PB, Metabolic influence of core ciliates within the rumen microbiome. ISME J, 17(7):1128-1140(2023) [pubmed]

submitter keyword: TEAGASC, metagenomics, metaproteomics

Phil Byron Pope
contact affiliation	Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway
contact email	phil.pope@nmbu.no
lab head
Magnus Arntzen
contact affiliation	Norwegian University of Life Sciences
contact email	magnus.arntzen@nmbu.no
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD040349

PRIDE project URI

• PRIDE
  1. PXD040349
     1. Label: PRIDE project
     2. Name: Integrative multi-omics investigation of microbes responsible for methne emission from cows fed either an ad lib or restricted diet