PXD040129

PXD040129 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Bone collagen from South African rodent species identification using Zooarchaeology by Mass Spectrometry (ZooMS)
Description	The dataset is for identification of MALDI markers for peptide mass fingerprinting of bone collagen for species identification using ZooMS. Corresponding MALDI data can be found through Zenodo at [ADD]. This dataset contatins: - raw files - peak list files - results files final confirmation biomarker searches - databases for the whole proteome, de novo marker development, and confirmation biomarker searches - csv file with information about the sample number
HostingRepository	MassIVE
AnnounceDate	2024-10-24
AnnouncementXML	Submission_2024-10-24_08:46:18.696.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Kristine Korzow Richter
SpeciesList	scientific name: Rodentia; common name: rodents; NCBI TaxID: 9989;
ModificationList	dihydroxylated proline
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-02-15 15:26:23	ID requested
⏵ 1	2024-10-24 08:46:19	announced

Publication List

Hillestad Nel T, Peters C, Korzow Richter K, Henshilwood C, van Niekerk K, Douka K. Peptide mass fingerprinting as a tool to assess micromammal biodiversity in Pleistocene South Africa: The case of Klipdrift Shelter. Quat. Sci. Rev. 2023 Dec
322
108380. doi: 10.1016/j.quascirev.2023.108380.

Hillestad Nel T, Peters C, Korzow Richter K, Henshilwood C, van Niekerk K, Douka K. Peptide mass fingerprinting as a tool to assess micromammal biodiversity in Pleistocene South Africa: The case of Klipdrift Shelter. Quat. Sci. Rev. 2023 Dec

322

108380. doi: 10.1016/j.quascirev.2023.108380.

Keyword List

submitter keyword: archaeology, bone, collagen, ZooMS, South Africa, rodent

submitter keyword: archaeology, bone, collagen, ZooMS, South Africa, rodent

Contact List

Katerina Douka
contact affiliation	University of Vienna
contact email	katerina.douka@univie.ac.at
lab head
Carli Peters
contact affiliation	Max Planck Institute of the Science of Human History
contact email	peters@shh.mpg.de
lab head
Kristine Korzow Richter
contact affiliation	Max Planck Institute for the Science of Human History
contact email	kkrichter@palaeome.org
lab head
Kristine Korzow Richter
contact affiliation	Max Planck Institute for the Science of Human History
contact email	kkrichter@palaeome.org
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v05/MSV000091290/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v05/MSV000091290/