PXD039939

PXD039939 is an original dataset announced via ProteomeXchange.

Title	Identification of Cross-linking partners of BpA modified p97 by photo cross-linking MS
Description	We wanted to see where and how the protein p97 interacts with its partner proteins p37, PPI,Sds22 and I3. To this end a p97 derivative with genetically encoded crosslinking amino acid (p-benzoyl-L-phenylalanine) was generated. After incubation with the partner proteins, photocross-linking and tryptic digest the resulting cross-linked peptides were analysed by mass spectrometry.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:02:01.076.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Farnusch Kaschani
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2023-02-08 01:14:59	ID requested
1	2023-07-10 05:31:19	announced
⏵ 2	2023-11-14 09:02:04	announced	2023-11-14: Updated project metadata.

van den Boom J, Marini G, Meyer H, Saibil HR, Structural basis of ubiquitin-independent PP1 complex disassembly by p97. EMBO J, 42(14):e113110(2023) [pubmed]

submitter keyword: AAA protease, BpA crosslinking,p97

Dr Farnusch Kaschani
contact affiliation	Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany
contact email	farnusch.kaschani@uni-due.de
lab head
Farnusch Kaschani
contact affiliation	University Duisburg-Essen
contact email	farnusch.kaschani@uni-due.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD039939

PRIDE project URI

• PRIDE
  1. PXD039939
     1. Label: PRIDE project
     2. Name: Identification of Cross-linking partners of BpA modified p97 by photo cross-linking MS