PXD039103
PXD039103 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | The S/T/Y-linked residue pairs identified by current software are unreliable |
Description | Here, by setting amino acids with chemically inert side chains such as glycine (G), valine (V), and leucine (L) as cross-linkable sites, which serves as a negative control, we show that the identifications of S/T/Y-linked peptides are as reliable as those of G/V/L-linked peptides. This is true across different NHS ester cross-linkers including DSS, DSSO, and DSBU, and across different search engines including MeroX, xiSearch, and pLink. |
HostingRepository | iProX |
AnnounceDate | 2022-12-26 |
AnnouncementXML | Submission_2022-12-26_22:13:48.553.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Yong Cao |
SpeciesList | scientific name: Bos taurus; NCBI TaxID: 9913; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Fusion; Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2022-12-26 19:10:20 | ID requested | |
1 | 2022-12-26 19:10:38 | announced | |
⏵ 2 | 2022-12-26 22:13:48 | announced | 2022-12-27: Update information |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: CXMS, cross-linking MS, S/T/Y-cross-link |
Contact List
Mengqiu Dong | |
---|---|
contact affiliation | National Institute of Biological Sciences, Beijing |
contact email | dongmengqiu@nibs.ac.cn |
lab head | |
Yong Cao | |
contact affiliation | National Institute of Biological Sciences, Beijing |
contact email | caoyong@nibs.ac.cn |
dataset submitter |
Full Dataset Link List
iProX dataset URI |