PXD038851

PXD038851 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Human LINE-1 ORF1p complex LC-MS/MS
Description	Host proteins regulate LINE-1 (L1) retrotransposition. Here, we use immunoprecipitation followed by liquid chromatography-tandem mass spectrometry to identify proteins that associate with the L1 ORF1-encoded protein (ORF1p) in ribonucleoprotein particles.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:44:02.739.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD038851
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Tomoichiro Miyoshi
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-12-14 22:10:07	ID requested
1	2023-03-11 11:24:04	announced
⏵ 2	2023-11-14 08:44:06	announced	2023-11-14: Updated project metadata.

Publication List

10.6019/PXD038851;
Luqman-Fatah A, Watanabe Y, Uno K, Ishikawa F, Moran JV, Miyoshi T, The interferon stimulated gene-encoded protein HELZ2 inhibits human LINE-1 retrotransposition and LINE-1 RNA-mediated type I interferon induction. Nat Commun, 14(1):203(2023) [pubmed]

10.6019/PXD038851;

Luqman-Fatah A, Watanabe Y, Uno K, Ishikawa F, Moran JV, Miyoshi T, The interferon stimulated gene-encoded protein HELZ2 inhibits human LINE-1 retrotransposition and LINE-1 RNA-mediated type I interferon induction. Nat Commun, 14(1):203(2023) [pubmed]

Keyword List

submitter keyword: Human, retrotransposon, LINE-1

submitter keyword: Human, retrotransposon, LINE-1

Contact List

Tomoichiro Miyoshi
contact affiliation	Department of Gene Mechanisms, Graduate School of Biostudies, Kyoto University, Kyoto 606-8501, Japan
contact email	miyoshi.tomoichiro.5e@kyoto-u.ac.jp
lab head
Tomoichiro Miyoshi
contact affiliation	Kyoto University
contact email	miyoshi.tomoichiro.5e@kyoto-u.ac.jp
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD038851
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD038851

PRIDE project URI

Repository Record List

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