PXD038775

PXD038775 is an original dataset announced via ProteomeXchange.

Title	Analysis of lactylome refines key molecular reprogramming mechanisms during oil production in Nannochloropsis oceanica
Description	Lysine lactylation as a type of posttranslational modifications (PTMs) is recently associated with chromatin remodeling and gene transcription, but lysine lactylation of histone and non-histone proteins has not yet been studied in Nannochloropsis oceanica. To examine the prevalence and function of lactylation in N. oceanica, protein lactylation modification profiles were tracked after nitrogen deprivation for three days using 4D label-free proteome method. Under nitrogen deprivation (ND) and nitrogen repletion (NR) cultivation conditions, we mapped lactylome of proliferating microalgal cells.
HostingRepository	PRIDE
AnnounceDate	2024-07-03
AnnouncementXML	Submission_2024-07-03_01:56:41.415.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Li Wei
SpeciesList	scientific name: Nannochloropsis oceanica strain IMET1; NCBI TaxID: 1333499;
ModificationList	acetylated residue
Instrument	timsTOF Pro; autoflex

Revision	Datetime	Status	ChangeLog Entry
0	2022-12-12 22:54:09	ID requested
⏵ 1	2024-07-03 01:56:42	announced

Ouyang L, Wang J, Zhu H, Wu Y, Wei L, . J Agric Food Chem, 72(24):13785-800(2024) [pubmed]

10.1021/acs.jafc.4c01807;

submitter keyword: Nannochloropsis, lactylation, LC-MS, Nitrogene deprivation, lactylome

Li WEI
contact affiliation	Hainan Normal University
contact email	weili@hainnu.edu.cn
lab head
Li Wei
contact affiliation	Hainan Normal University
contact email	weili@hainnu.edu.cn
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/07/PXD038775

PRIDE project URI

• PRIDE
  1. PXD038775
     1. Label: PRIDE project
     2. Name: Analysis of lactylome refines key molecular reprogramming mechanisms during oil production in Nannochloropsis oceanica