⮝ Full datasets listing

PXD038397

PXD038397 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleShotgun analysis of proteins in NDUFA11 KO and WT HEK 293T cells.
DescriptionThe effect of the depletion of an ETC complex I protein component - NDUFA11 on the proteome in HEK 293T cells was studied. TMT-based relative quantification of protein levels were performed in NDUFA11 KO vs WT cells and in NDUFA11 KO vs WT cells that expressed an EGFP-MAPT (Tau protein) construct. In this dataset relative levels of proteins in total cell extracts and in the soluble fraction (post centrifugation at 125,000 g, at which speed protein aggregates were isolated as pellets) were measured. This dataset is directly related to the dataset PXD031374 (protein aggregates isolated as pellets post centrifugation at 125,000 g).
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_05:51:55.085.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterRemigiusz Serwa
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListacetylated residue; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
InstrumentQ Exactive HF-X
Dataset History
RevisionDatetimeStatusChangeLog Entry
02022-11-26 04:06:17ID requested
12023-07-03 13:34:07announced
22023-11-14 07:01:27announced2023-11-14: Updated project metadata.
32024-10-22 05:51:55announced2024-10-22: Updated project metadata.
Publication List
10.1038/S41467-023-39642-8;
Keyword List
submitter keyword: NDUFA11 KO, EGFP-MAPT expression, ETC Complex I, HEK 293T
Contact List
Prof. Agnieszka Chacinska
contact affiliationReMedy International Research Agenda Unit, IMol Polish Academy of Sciences, Warsaw, Poland
contact emaila.chacinska@imol.institute
lab head
Remigiusz Serwa
contact affiliationThe International Institute of Molecular Mechanisms and Machines, Polish Academy of Sciences
contact emailr.serwa@imol.edu.pl
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD038397
PRIDE project URI
Repository Record List
[ + ]