PXD038273

PXD038273 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Immunopeptidomics of malignant mesothelioma to identify target antigens for T cell Immunotherapy
Description	Immunoaffinity purification was performed on human mesothelioma cell lines NCI-H2452, NCI-H28, MSTO-211H and JL1, on murine mesothelioma cell line AB12, as well as on mesothelioma samples from two patients (including tumor and benign tissues). Thereafter Immunopeptidomics by Mass Spectrometry on a Tims TOF Pro revealed the MHC peptide landscape of mesothelioma.
HostingRepository	PRIDE
AnnounceDate	2023-09-08
AnnouncementXML	Submission_2023-09-08_06:59:05.522.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	RuiBranca
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue
Instrument	timsTOF Pro

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-11-22 02:58:42	ID requested
⏵ 1	2023-09-08 06:59:05	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: JL1, H28, MSTO211H, Ab12, Ligandome, Malignant Pleural Mesothelioma, cell lines, Immunopeptidome, Ligandomics, Immunopeptidomics, H2452,Cancer

submitter keyword: JL1, H28, MSTO211H, Ab12, Ligandome, Malignant Pleural Mesothelioma, cell lines, Immunopeptidome, Ligandomics, Immunopeptidomics, H2452,Cancer

Contact List

JanneLehtiö
contact affiliation	Dept. Oncology-Pathology, SciLifeLab, Karolinska Institutet, Stockholm, Sweden
contact email	janne.lehtio@ki.se
lab head
RuiBranca
contact affiliation	Clinical Proteomics Unit, Dep. of Oncology-Pathology
contact email	rui.mamede-branca@ki.se
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD038273
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD038273

PRIDE project URI

Repository Record List

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