PXD037839

PXD037839 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	single bacterial species LC-MS/MS
Description	Analysis of six types of single bacterial species, including Bacteroides vulgatus ATCC 8482,Bacteroides ovatus ATCC 8483, Bacteroides uniformis ATCC 8492, Blautia hydrogenotrophica DSM 10507, Bacteroides thetaiotaomicron ATCC 29148, Escherichia coli DSM 101114
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:43:49.507.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Kai Cheng
SpeciesList	scientific name: Bacteroides ovatus ATCC 8483; NCBI TaxID: 411476; scientific name: Blautia hydrogenotrophica DSM 10507; NCBI TaxID: 476272; scientific name: Bacteroides uniformis ATCC 8492; NCBI TaxID: 411479; scientific name: Phocaeicola vulgatus ATCC 8482; NCBI TaxID: 435590;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-10-31 07:57:08	ID requested
1	2023-03-11 11:07:43	announced
⏵ 2	2023-11-14 08:43:57	announced	2023-11-14: Updated project metadata.

Publication List

Cheng K, Ning Z, Li L, Zhang X, Serrana JM, Mayne J, Figeys D, MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database. J Proteome Res, 22(2):387-398(2023) [pubmed]

Cheng K, Ning Z, Li L, Zhang X, Serrana JM, Mayne J, Figeys D, MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database. J Proteome Res, 22(2):387-398(2023) [pubmed]

Keyword List

submitter keyword: single bacterial species, LC-MS/MS

submitter keyword: single bacterial species, LC-MS/MS

Contact List

Kai Cheng
contact affiliation	School of Pharmaceutical Sciences, Faculty of Medicine, University of Ottawa
contact email	ckkazuma@gmail.com
lab head
Kai Cheng
contact affiliation	University of Ottawa
contact email	ckkazuma@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD037839
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD037839

PRIDE project URI

Repository Record List

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