PXD037805

PXD037805 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteogenomic analysis of caeca dissected from Gammarus fossarum
Description	Proteomic analysis of caeca of gammarids sampled in four different population of Gammarus fossarus (Mandorne, Séran, Ardillat, Baculy). The aim of the project is to analyze the environmental effect of inter- and intra- population proteomic diversity of a key organ involved in organism fitness and tolerance to metal contamination.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:04:19.608.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD037805
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Gammarus fossarum; NCBI TaxID: 52638;
ModificationList	monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-10-28 07:34:49	ID requested
1	2023-07-25 09:53:09	announced
⏵ 2	2023-11-14 09:04:21	announced	2023-11-14: Updated project metadata.

Publication List

10.6019/PXD037805;
Lepr, ê, tre M, Chaumot A, Aboud R, Delorme N, Espeyte A, Salvador A, Ayciriex S, Armengaud J, Coquery M, Geffard O, Degli-Esposti D, Dynamic Multiple Reaction Monitoring of amphipod Gammarus fossarum caeca expands molecular information for understanding the impact of contaminants. Sci Total Environ, 893():164875(2023) [pubmed]

10.6019/PXD037805;

Lepr, ê, tre M, Chaumot A, Aboud R, Delorme N, Espeyte A, Salvador A, Ayciriex S, Armengaud J, Coquery M, Geffard O, Degli-Esposti D, Dynamic Multiple Reaction Monitoring of amphipod Gammarus fossarum caeca expands molecular information for understanding the impact of contaminants. Sci Total Environ, 893():164875(2023) [pubmed]

Keyword List

ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project
submitter keyword: heavy metal response,Proteomics, Proteogenomics, fitness, vulnerability, tolerance, Caeca, Gammarus fossarum

ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project

submitter keyword: heavy metal response,Proteomics, Proteogenomics, fitness, vulnerability, tolerance, Caeca, Gammarus fossarum

Contact List

Jean Armengaud
contact affiliation	CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD037805
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD037805

PRIDE project URI

Repository Record List

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