PXD037805 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteogenomic analysis of caeca dissected from Gammarus fossarum |
Description | Proteomic analysis of caeca of gammarids sampled in four different population of Gammarus fossarus (Mandorne, Séran, Ardillat, Baculy). The aim of the project is to analyze the environmental effect of inter- and intra- population proteomic diversity of a key organ involved in organism fitness and tolerance to metal contamination. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_09:04:19.608.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD037805 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Jean ARMENGAUD |
SpeciesList | scientific name: Gammarus fossarum; NCBI TaxID: 52638; |
ModificationList | monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-10-28 07:34:49 | ID requested | |
1 | 2023-07-25 09:53:09 | announced | |
⏵ 2 | 2023-11-14 09:04:21 | announced | 2023-11-14: Updated project metadata. |
Publication List
10.6019/PXD037805; |
Lepr, ê, tre M, Chaumot A, Aboud R, Delorme N, Espeyte A, Salvador A, Ayciriex S, Armengaud J, Coquery M, Geffard O, Degli-Esposti D, Dynamic Multiple Reaction Monitoring of amphipod Gammarus fossarum caeca expands molecular information for understanding the impact of contaminants. Sci Total Environ, 893():164875(2023) [pubmed] |
Keyword List
ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project |
submitter keyword: heavy metal response,Proteomics, Proteogenomics, fitness, vulnerability, tolerance, Caeca, Gammarus fossarum |
Contact List
Jean Armengaud |
contact affiliation | CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France |
contact email | jean.armengaud@cea.fr |
lab head | |
Jean ARMENGAUD |
contact affiliation | Li2D |
contact email | jean.armengaud@cea.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD037805 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD037805
- Label: PRIDE project
- Name: Proteogenomic analysis of caeca dissected from Gammarus fossarum