PXD037725

PXD037725 is an original dataset announced via ProteomeXchange.

Title	Proteomic analysis of the role of RALF34 small signaling peptides in the regulation of cucumber (Cucumis sativus) root development
Description	To elucidate the functional role of the small signaling peptide RALF34 in the parental root meristem and its role in lateral root initiation, we studied changes in Cucumis sativus proteome during CsRALF34 gene overexpression. Composite plants with transgenic root systems carrying the construct for CsRALF34 overexpression (p35S::CsRALF34-TermAct) and control roots carrying p35S-GUS-TermAct were obtained and their proteome profiles were compared.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:46:56.850.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD037725
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Egor Repkin
SpeciesList	scientific name: Cucumis sativus; NCBI TaxID: 3659;
ModificationList	acetylated residue; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	timsTOF Pro 2

Revision	Datetime	Status	ChangeLog Entry
0	2022-10-26 01:00:37	ID requested
1	2023-05-10 13:43:43	announced
⏵ 2	2023-11-14 08:47:00	announced	2023-11-14: Updated project metadata.

10.6019/PXD037725;

Shumilina J, Kiryushkin AS, Frolova N, Mashkina V, Ilina EL, Puchkova VA, Danko K, Silinskaya S, Serebryakov EB, Soboleva A, Bilova T, Orlova A, Guseva ED, Repkin E, Pawlowski K, Frolov A, Demchenko KN, Integrative Proteomics and Metabolomics Analysis Reveals the Role of Small Signaling Peptide Rapid Alkalinization Factor 34 (RALF34) in Cucumber Roots. Int J Mol Sci, 24(8):(2023) [pubmed]

submitter keyword: lateral root initiation, CsRALF34, RALF34,Cucumber, proteome, Cucumis sativus

Andrej Frolov
contact affiliation	Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, 06120 Halle (Saale), Germany
contact email	Andrej.Frolov@ipb-halle.de
lab head
Egor Repkin
contact affiliation	Saint-Petersburg State University
contact email	erepkin53@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD037725

PRIDE project URI

• PRIDE
  1. PXD037725
     1. Label: PRIDE project
     2. Name: Proteomic analysis of the role of RALF34 small signaling peptides in the regulation of cucumber (Cucumis sativus) root development