PXD037685

PXD037685 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	A consortium of ectomycorrhizal fungi and bacteria differentially regulates organic carbon and exometabolites production across Populus trichocarpa genotypes.
Description	Poplar is a short-rotation woody crop routinely studied because of its importance as a sustainable bioenergy crop. The establishment of a successful poplar plantation partially depends on its rhizosphere, a dynamic zone governed by complex interactions between plant roots and a plethora of commensal, mutualistic, symbiotic, or pathogenic microbes that shape plant fitness. Here, we examined a consortium of ectomycorrhizal fungi and a beneficial Pseudomonas sp. strain GM41 for their effect on plant growth (height, stem girth, leaf, and root growth) and growth rate over time of four poplar genotypes of Populus trichocarpa. We also compare the total organic carbon and plant exometabolites profiles produced by these different poplar genotypes when colonized by the microbial consortium. We determined that when comparing the treatments to the control, plant growth parameters were not significantly different across the poplar genotypes eight weeks post-inoculation. However, total organic carbon and exometabolite profiles were significantly different between the genotypes and due to the treatments. These findings indicate that this microbial consortium can induce early and different signaling responses in poplar.
HostingRepository	MassIVE
AnnounceDate	2022-11-23
AnnouncementXML	Submission_2022-11-23_09:36:42.803.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tomas Allen Rush
SpeciesList	scientific name: Populus trichocarpa; common name: black cottonwood; NCBI TaxID: 3694;
ModificationList	unknown modification
Instrument	instrument model

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-10-24 08:16:42	ID requested
⏵ 1	2022-11-23 09:36:43	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: poplar exometabolites, mycorrhizal fungi, beneficial bacteria, Pseudomonas, organic carbons, metabolomics

submitter keyword: poplar exometabolites, mycorrhizal fungi, beneficial bacteria, Pseudomonas, organic carbons, metabolomics

Contact List

Tomas Allen Rush
contact affiliation	Oak Ridge National Laboratory
contact email	rushta@ornl.gov
lab head
Tomas Allen Rush
contact affiliation	Oak Ridge National Laboratory
contact email	rushta@ornl.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000090574/