PXD037424

PXD037424 is an original dataset announced via ProteomeXchange.

Title	LC-MSMS analysis of liver in the gilt-head sea bream depending on pollutant levels
Description	The oceans are now all affected by human activities. The study of the impact of pollution on the health status of exploited marine populations is essential to better understand the direct constraints that stress generates on growth, reproduction, immune system and, ultimately, on the reproductive success of animals. Interactions between different stressors can generate non-additive effects ("cocktail effects"), which makes experimental models under controlled conditions based on only one or a few "stressors" insufficient. Thus, quantitative proteomics was used to analyse liver proteome of wild gilt-head sea bream evolving in the Mediterranean Sea (coastal area) with contrasting levels of organic and inorganic contamination. The prospects of researching biomarkers of health status that can be used as indicators of the status of a population or an ecosystem are of major interest for the monitoring and management of natural environments, hence promoting the conservation and management of marine species.
HostingRepository	PRIDE
AnnounceDate	2025-03-17
AnnouncementXML	Submission_2025-03-17_05:43:35.587.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Fabrice BERTILE
SpeciesList	scientific name: Sparus aurata; NCBI TaxID: 8175;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF-X

Revision	Datetime	Status	ChangeLog Entry
0	2022-10-14 06:28:11	ID requested
⏵ 1	2025-03-17 05:43:36	announced

10.1016/j.envpol.2023.122789;

Beauvieux A, Fromentin JM, Romero D, Couffin N, Brown A, Metral L, Bourjea J, Bertile F, Schull Q, Molecular fingerprint of gilthead seabream physiology in response to pollutant mixtures in the wild. Environ Pollut, 340(Pt 2):122789(2024) [pubmed]

submitter keyword: Fish, Health biomarker, Pollution, quantitative proteomics

Sarah Cianférani
contact affiliation	Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, France
contact email	sarah.cianferani@unistra.fr
lab head
Fabrice BERTILE
contact affiliation	CNRS
contact email	fbertile@unistra.fr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/03/PXD037424

PRIDE project URI

• PRIDE
  1. PXD037424
     1. Label: PRIDE project
     2. Name: LC-MSMS analysis of liver in the gilt-head sea bream depending on pollutant levels