PXD037313 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | LC-MSMS analysis of muscle in the European pilchard depending on pollutant levels |
Description | The oceans are now all affected by human activities. The study of the impact of pollution on the health status of exploited marine populations is essential to better understand the direct constraints that stress generates on growth, reproduction, immune system and, ultimately, on the reproductive success of animals. Interactions between different stressors can generate non-additive effects ("cocktail effects"), which makes experimental models under controlled conditions based on only one or a few "stressors" insufficient. Thus, quantitative proteomics was used to analyse muscle proteome of wild European pilchards evolving in the Mediterranean Sea with contrasting levels of organic and inorganic contamination. The prospects of researching biomarkers of health status that can be used as indicators of the status of a population or an ecosystem are of major interest for the monitoring and management of natural environments, hence promoting the conservation and management of marine species. |
HostingRepository | PRIDE |
AnnounceDate | 2024-01-30 |
AnnouncementXML | Submission_2024-01-30_06:13:17.356.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Fabrice BERTILE |
SpeciesList | scientific name: Sardina pilchardus; NCBI TaxID: 27697; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive HF-X |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-10-12 08:30:26 | ID requested | |
⏵ 1 | 2024-01-30 06:13:17 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Fish, Health biomarker, Pollution, quantitative proteomics |
Contact List
Sarah Cianférani |
contact affiliation | Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, France |
contact email | sarah.cianferani@unistra.fr |
lab head | |
Fabrice BERTILE |
contact affiliation | CNRS |
contact email | fbertile@unistra.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD037313 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD037313
- Label: PRIDE project
- Name: LC-MSMS analysis of muscle in the European pilchard depending on pollutant levels