PXD037089

PXD037089 is an original dataset announced via ProteomeXchange.

Title	Ciona savignyi notochord LC-MS/MS based on 4D Mass Spectromete
Description	Lumen formation and inflation are crucial for tubular organ morphogenesis, yet the underling mechanism remains largely unrevealed. Here, we applied 4D proteomics to screen the lumenogenesis-related proteins and reveal the potentially biological pathways that are involved in lumen inflation during notochord lumen formation in ascidian Ciona savignyi.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:46:20.792.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	zhuqing wang
SpeciesList	scientific name: Ciona savignyi; NCBI TaxID: 51511;
ModificationList	No PTMs are included in the dataset
Instrument	timsTOF Pro

Revision	Datetime	Status	ChangeLog Entry
0	2022-09-30 03:42:58	ID requested
1	2023-05-10 13:18:41	announced
⏵ 2	2023-11-14 08:46:21	announced	2023-11-14: Updated project metadata.

Wang Z, Ouyang X, Tan Z, Yang L, Dong B, Quantitative Phosphoproteomics Reveals the Requirement of DYRK1-Mediated Phosphorylation of Ion Transport- and Cell Junction-Related Proteins for Notochord Lumenogenesis in Ascidian. Cells, 12(6):(2023) [pubmed]

submitter keyword: Ascidian, notochord, lumenogenesis, LC-MS/MS

Bo DONG
contact affiliation	Sars-Fang Centre, MoE Key Laboratory of Marine Genetics and Breeding, College of Marine Life Sciences, Ocean University of China, Qingdao 266003, China.
contact email	BODONG@OUC.EDU.CN
lab head
zhuqing wang
contact affiliation	Ocean University of China
contact email	wangzhuqing@stu.ouc.edu.cn
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD037089

PRIDE project URI

• PRIDE
  1. PXD037089
     1. Label: PRIDE project
     2. Name: Ciona savignyi notochord LC-MS/MS based on 4D Mass Spectromete