PXD036988

PXD036988 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Bacillus cereus biofilm formation with the aromatic amino acid L-tyrosine
Description	The aim of this study was to identify and elaborate on the importance of the shikimate pathway, and specifically the aromatic amino acid L-tyrosine derived from it, for the formation of (air-liquid) biofilm of the food pathogen Bacillus cereus.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:04:49.451.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sjef Boeren
SpeciesList	scientific name: Bacillus cereus (strain ATCC 14579 / DSM 31); NCBI TaxID: 226900;
ModificationList	S-carboxamidoethyl-L-cysteine; acetylated residue; monohydroxylated residue; deamidated residue
Instrument	Q Exactive HF-X

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-09-25 14:55:02	ID requested
1	2023-10-03 05:27:46	announced
2	2023-11-14 09:05:45	announced	2023-11-14: Updated project metadata.
⏵ 3	2024-10-22 06:04:50	announced	2024-10-22: Updated project metadata.

Publication List

Huijboom L, Tempelaars M, Fan M, Zhu Y, Boeren S, van der Linden E, Abee T, l-tyrosine modulates biofilm formation of Bacillus cereus ATCC 14579. Res Microbiol, 174(6):104072(2023) [pubmed]
10.1016/j.resmic.2023.104072;

Huijboom L, Tempelaars M, Fan M, Zhu Y, Boeren S, van der Linden E, Abee T, l-tyrosine modulates biofilm formation of Bacillus cereus ATCC 14579. Res Microbiol, 174(6):104072(2023) [pubmed]

10.1016/j.resmic.2023.104072;

Keyword List

submitter keyword: Bacillus cereus, air-liquid biofilm, shikimate pathway, pathogen

submitter keyword: Bacillus cereus, air-liquid biofilm, shikimate pathway, pathogen

Contact List

Sjef Boeren
contact affiliation	Wageningen University
contact email	sjef.boeren@wur.nnl
lab head
Sjef Boeren
contact affiliation	Biochemistry
contact email	sjef.boeren@wur.nl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD036988
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD036988

PRIDE project URI

Repository Record List

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