PXD036982

PXD036982 is an original dataset announced via ProteomeXchange.

Title	All-in-One Digital Microfluidics Pipeline for Proteomic Sample Preparation and Analysis
Description	Dimethyl labeling was integrated into the microfluidic pipeline to allow for precise relative quantification of the trace samples at the nanogram level, and the new pipeline was applied to evaluating cancer cell lines and cancer tissue samples.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:00:05.451.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jiaxi Peng
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF-X

Revision	Datetime	Status	ChangeLog Entry
0	2022-09-25 14:36:15	ID requested
1	2023-03-24 11:59:42	announced
⏵ 2	2023-11-14 09:00:05	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: Digital microfluidics, proteomics, dimethyl labeling, cancer sub-typing, interface, miniaturized sample

Aaron R. Wheeler
contact affiliation	Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, ON, M5S 3H6, Canada Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON, M5S 3E1, Canada Institute of Biomedical Engineering, University of Toronto, 164 College Street, Toronto, ON, M5S 3G9, Canada.
contact email	aaron.wheeler@utoronto.ca
lab head
Jiaxi Peng
contact affiliation	Postdoctoral Fellow
contact email	jiaxi.peng@mail.utoronto.ca
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD036982

PRIDE project URI

• PRIDE
  1. PXD036982
     1. Label: PRIDE project
     2. Name: All-in-One Digital Microfluidics Pipeline for Proteomic Sample Preparation and Analysis