PXD036960

PXD036960 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	In-depth data independent acquisition-mass spectrometry proteomic analysis of juvenile dermatomyositis serum samples reveals protein expression changes associated with muscle-specific autoantibodies
Description	We analyzed sera from five JDM patients, each with three MSAs (anti-melanoma differentiation-associated protein 5 antibodies; anti-MDA5, anti-nuclear matrix protein 2 antibodies; anti-NXP2, or anti-transcriptional intermediary factor 1 alpha and/or gamma subunits antibodies; anti-TIF-1γ) and five healthy controls by single-shot LC-MS/MS in data-independent acquisition (DIA) mode to construct protein profiles associated with clinical symptoms and MSAs.
HostingRepository	jPOST
AnnounceDate	2023-04-23
AnnouncementXML	Submission_2023-04-23_07:52:17.321.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Hironori Sato
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; unknown modification
Instrument	instrument

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-09-24 19:42:07	ID requested
⏵ 1	2023-04-23 07:52:18	announced

Publication List

Sato H, Inoue Y, Kawashima Y, Konno R, Ohara O, Kuwana M, Kobayashi N, Takezaki S, Akioka S, In-depth proteomic analysis of juvenile dermatomyositis serum reveals protein expression associated with muscle-specific autoantibodies. Rheumatology (Oxford), 62(10):3501-3506(2023) [pubmed]

Sato H, Inoue Y, Kawashima Y, Konno R, Ohara O, Kuwana M, Kobayashi N, Takezaki S, Akioka S, In-depth proteomic analysis of juvenile dermatomyositis serum reveals protein expression associated with muscle-specific autoantibodies. Rheumatology (Oxford), 62(10):3501-3506(2023) [pubmed]

Keyword List

submitter keyword: JDM, MSA, serum, DIA-MS/MS, profiling

submitter keyword: JDM, MSA, serum, DIA-MS/MS, profiling

Contact List

Hironori Sato
lab head
Hironori Sato
contact affiliation	Chiba university
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001539/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001539/