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PXD036672

PXD036672 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteomes and Ubiquitylomes Analysis in rosa hybrida during petal abscission.
DescriptionThe ubiquitome dataset by imputing missing values and normalization of 6844 ubiquitin modified peptides, 7026 lysine ubiquitination (Kub) site were defined in 2720 proteins, of which 3718 Kub site in 1379 proteins were quantified. Among these quantified Kub sites and proteins, 139 sites in 100 proteins were identified as upregulated ubiquitination sites, and 55 sites in 48 proteins were identified as downregulated ubiquitination sites at a threshold of 1.5 (P < 0.05)
HostingRepositoryPRIDE
AnnounceDate2023-11-14
AnnouncementXMLSubmission_2023-11-14_08:37:52.682.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterChuyan Jiang
SpeciesList scientific name: Rosa chinensis; NCBI TaxID: 74649;
ModificationListubiquitinylated lysine
InstrumentQ Exactive Plus
Dataset History
RevisionDatetimeStatusChangeLog Entry
02022-09-12 06:44:25ID requested
12023-03-10 23:08:38announced
22023-11-14 08:37:54announced2023-11-14: Updated project metadata.
Publication List
Jiang C, Jiang T, Deng S, Yuan C, Liang Y, Li S, Ma C, Gao Y, Integrative analysis of transcriptome, proteome, and ubiquitome changes during rose petal abscission. Front Plant Sci, 13():1041141(2022) [pubmed]
Keyword List
submitter keyword: Ubiquitination, rosa hybrida, petal abscission
Contact List
Chao Ma
contact affiliationChina Agricultural University
contact emailmac@cau.edu.cn
lab head
Chuyan Jiang
contact affiliationChina Agricultural University
contact emailcau_jcy@163.com
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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