PXD036672 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomes and Ubiquitylomes Analysis in rosa hybrida during petal abscission. |
Description | The ubiquitome dataset by imputing missing values and normalization of 6844 ubiquitin modified peptides, 7026 lysine ubiquitination (Kub) site were defined in 2720 proteins, of which 3718 Kub site in 1379 proteins were quantified. Among these quantified Kub sites and proteins, 139 sites in 100 proteins were identified as upregulated ubiquitination sites, and 55 sites in 48 proteins were identified as downregulated ubiquitination sites at a threshold of 1.5 (P < 0.05) |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_08:37:52.682.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Chuyan Jiang |
SpeciesList | scientific name: Rosa chinensis; NCBI TaxID: 74649; |
ModificationList | ubiquitinylated lysine |
Instrument | Q Exactive Plus |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-09-12 06:44:25 | ID requested | |
1 | 2023-03-10 23:08:38 | announced | |
⏵ 2 | 2023-11-14 08:37:54 | announced | 2023-11-14: Updated project metadata. |
Publication List
Jiang C, Jiang T, Deng S, Yuan C, Liang Y, Li S, Ma C, Gao Y, Integrative analysis of transcriptome, proteome, and ubiquitome changes during rose petal abscission. Front Plant Sci, 13():1041141(2022) [pubmed] |
Keyword List
submitter keyword: Ubiquitination, rosa hybrida, petal abscission |
Contact List
Chao Ma |
contact affiliation | China Agricultural University |
contact email | mac@cau.edu.cn |
lab head | |
Chuyan Jiang |
contact affiliation | China Agricultural University |
contact email | cau_jcy@163.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD036672 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD036672
- Label: PRIDE project
- Name: Proteomes and Ubiquitylomes Analysis in rosa hybrida during petal abscission.