PXD036565

PXD036565 is an original dataset announced via ProteomeXchange.

Title	Paenibacillus sp. GKG secreted proteins LC-MSMS
Description	The advances of next-generation sequencing technologies enabled the continuous growth in the number of gene sequences deposited into the CAZy database, meanwhile, the number of biochemically characterized CAZymes is growing at a much slower rate. The biochemical characterization of discovered enzymes is important because of the industrially relevant properties such as high thermal stability or cold-adaptivity that these enzymes may possess. The aim of our project is to screen for up-to-date biochemically uncharacterized CAZymes. We screen for microorganisms that are able to produce extracellular CAZymes. We use LC-MSMS proteomics to identify extracellular enzymes produced by the selected microorganisms.
HostingRepository	PRIDE
AnnounceDate	2022-10-20
AnnouncementXML	Submission_2022-10-20_03:15:47.737.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	GediminasPlakys
SpeciesList	scientific name: unclassified Paenibacillus; NCBI TaxID: 185978;
ModificationList	monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Synapt MS

Revision	Datetime	Status	ChangeLog Entry
0	2022-09-08 06:38:13	ID requested
⏵ 1	2022-10-20 03:15:48	announced

Dataset with its publication pending

submitter keyword: LC-MSMS,Paenibacillus, secreted proteins, GHs

RolandasMeškys
contact affiliation	Department of Molecular Microbiology and Biotechnology, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio 7, Vilnius, LT-10257, Lithuania
contact email	rolandas.meskys@bchi.vu.lt
lab head
GediminasPlakys
contact affiliation	Department of Molecular Microbiology and Biotechnology, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio 7, Vilnius, LT-10257, Lithuania
contact email	gediminas.plakys@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD036565

PRIDE project URI

• PRIDE
  1. PXD036565
     1. Label: PRIDE project
     2. Name: Paenibacillus sp. GKG secreted proteins LC-MSMS