PXD036392

PXD036392 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Shotgun proteomics of Sparus aurata hepatic stress response
Description	This study characterizes the liver stress proteome of fish submitted to overcrowding (OC), repeated net-handling (NET) and hypoxia (HYP). Fish trials were conducted in triplicate tanks and two fish per tank were randomly sampled for MS analysis. This work aims to disclose most significant changes in signaling and metabolic pathways involved in the stress response. This data-driven knowledge may ultimately contribute for the improvement of species-specific welfare management protocols, towards a sustainable aquaculture.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_07:53:34.543.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD036392
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Ana Paula Farinha
SpeciesList	scientific name: Sparus aurata; NCBI TaxID: 8175;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-08-30 04:32:39	ID requested
1	2022-12-13 09:42:00	announced
⏵ 2	2023-11-14 07:53:38	announced	2023-11-14: Updated project metadata.

Publication List

10.6019/PXD036392;
Raposo de Magalh, ã, es C, Farinha AP, Blackburn G, Whitfield PD, Carrilho R, Schrama D, Cerqueira M, Rodrigues PM, Gilthead Seabream Liver Integrative Proteomics and Metabolomics Analysis Reveals Regulation by Different Prosurvival Pathways in the Metabolic Adaptation to Stress. Int J Mol Sci, 23(23):(2022) [pubmed]

10.6019/PXD036392;

Raposo de Magalh, ã, es C, Farinha AP, Blackburn G, Whitfield PD, Carrilho R, Schrama D, Cerqueira M, Rodrigues PM, Gilthead Seabream Liver Integrative Proteomics and Metabolomics Analysis Reveals Regulation by Different Prosurvival Pathways in the Metabolic Adaptation to Stress. Int J Mol Sci, 23(23):(2022) [pubmed]

Keyword List

submitter keyword: stress, fish, aquaculture,Gilthead seabream

submitter keyword: stress, fish, aquaculture,Gilthead seabream

Contact List

Pedro Miguel L. Rodrigues
contact affiliation	Center of Marine Sciences (CCMAR), Universidade do Algarve, Faro, Portugal
contact email	pmrodrig@ualg.pt
lab head
Ana Paula Farinha
contact affiliation	Universidade Algarve
contact email	apaula.farinha@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/12/PXD036392
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/12/PXD036392

PRIDE project URI

Repository Record List

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