PXD036132

PXD036132 is an original dataset announced via ProteomeXchange.

Title	Proteomics to identify putative genes underlying fruit ripening and related to long shelf life
Description	Our aim was to gather additional evidence of tomato fruit ripening by assessing two long shelf life near isogenic lines (NILs). These two NILs, named NIL115 and NIL080, carried wild introgression provided by S. pimpinellifolium accession LA0722 in the genetic background of Caimanta (CAI) from S. lycopersicum. Pericarp tissue was collected from the four genotypes (NIL115, NIL080, CAI and LA0722) at two ripening stages: mature green (MG) and red ripe (RR). A label-free quantitation (LFQ) proteomic analysis was carried out to identify differentially abundant proteins between MG and RR.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_06:54:25.800.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Melisa Di Giacomo
SpeciesList	scientific name: Solanum lycopersicum; NCBI TaxID: 4081; scientific name: Solanum pimpinellifolium; NCBI TaxID: 4084;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2022-08-17 00:55:51	ID requested
1	2023-08-01 19:36:55	announced
⏵ 2	2023-11-14 06:54:26	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: fruit ripening, ripening stage

red ripe,Solanum spp., fruit softening, mature green

Javier Hernán Pereira da Costa
contact affiliation	Instituto de Investigaciones en Ciencias Agrarias (IICAR-CONICET-UNR), Facultad de Ciencias Agrarias Universidad Nacional de Rosario (UNR). Campo Experimental “José Villarino”, S2125ZAA Zavalla, ARGENTINA
contact email	jpereira@unr.edu.ar
lab head
Melisa Di Giacomo
contact affiliation	Instituto de Investigaciones en Ciencias Agrarias (IICAR-CONICET-UNR), Facultad de Ciencias Agrarias - Universidad Nacional de Rosario (UNR). Campo Experimental “José Villarino”, S2125ZAA Zavalla, ARGENTINA
contact email	digiacomo@iicar-conicet.gob.ar
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/08/PXD036132

PRIDE project URI

• PRIDE
  1. PXD036132
     1. Label: PRIDE project
     2. Name: Proteomics to identify putative genes underlying fruit ripening and related to long shelf life