PXD035809

PXD035809 is an original dataset announced via ProteomeXchange.

Title	Bifidobacterium infantis utilizes N-acetylglucosamine nitrogen
Description	15N-labeled N-acetylglucosamine (NAG) fed to B. infantis cells are incorporated into its proteome. This indicates that NAG, an amino sugar residue of human milk oligosaccharides (HMO) and other biopolymers, is used as a nitrogen source. Transcriptomics while subsisting on NAG nitrogen are consistent with the proteomics results. This further indicates that B. infantis utilizes NAG nitrogen in and shunts it towards a fundamental cellular processes.
HostingRepository	PRIDE
AnnounceDate	2023-05-18
AnnouncementXML	Submission_2023-05-18_06:43:04.361.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	AshaRani
SpeciesList	scientific name: Bacteria; NCBI TaxID: NCBITaxon:2; scientific name: Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12); NCBI TaxID: 391904;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2022-08-04 07:59:11	ID requested
⏵ 1	2023-05-18 06:43:04	announced

Dataset with its publication pending

ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Food and Nutrition (B/D-HPP), Human Proteome Project

submitter keyword: human milk oligosaccharides, N-acetyl glucosamine, 2-oxoglutarate, nitrogen metabolism,Bifidobacterium longum subsp. infantis

David A.Sela
contact affiliation	David A. Sela Associate Professor, Dept. of Food Science Adjunct Associate Professor, Dept. of Microbiology University of Massachusetts Amherst Adjunct Associate Professor, Dept. of Microbiology & Physiological Systems University of Massachusetts Medical School selalab.org 413.545.1010
contact email	davidsela@umass.edu
lab head
AshaRani
contact affiliation	University of Massachusetts Amherst
contact email	arani@umass.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD035809

PRIDE project URI

• PRIDE
  1. PXD035809
     1. Label: PRIDE project
     2. Name: Bifidobacterium infantis utilizes N-acetylglucosamine nitrogen