PXD035507

PXD035507 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Engineering Transcriptional Regulation of Pentose Metabolism in Rhodosporidium toruloides for Improved Conversion of Xylose to Bioproducts
Description	Discovery proteomics on three R. toruloides strains with differing Pnt1 expression (WT IFO 0880, OE-Pnt1, and delta Pnt1) grown on either xylose or xylose and glycerol at mid-log phase.
HostingRepository	MassIVE
AnnounceDate	2022-11-02
AnnouncementXML	Submission_2022-11-02_15:39:32.486.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Rhodosporidium toruloides NP11; NCBI TaxID: 1130832;
ModificationList	Carbamidomethyl; Oxidation
Instrument	Q Exactive HF-X

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-07-21 11:25:54	ID requested
⏵ 1	2022-11-02 15:39:33	announced

Publication List

Day NJ, Zhang T, Gaffrey MJ, Zhao R, Fillmore TL, Moore RJ, Rodney GG, Qian WJ, A deep redox proteome profiling workflow and its application to skeletal muscle of a Duchenne Muscular Dystrophy model. Free Radic Biol Med, 193(Pt 1):373-384(2022) [pubmed]

Day NJ, Zhang T, Gaffrey MJ, Zhao R, Fillmore TL, Moore RJ, Rodney GG, Qian WJ, A deep redox proteome profiling workflow and its application to skeletal muscle of a Duchenne Muscular Dystrophy model. Free Radic Biol Med, 193(Pt 1):373-384(2022) [pubmed]

Keyword List

submitter keyword: xylose, glycerol, metabolism

submitter keyword: xylose, glycerol, metabolism

Contact List

Kristin E. Burnum-Johnson
contact affiliation	Pacific Northwest National Laboratory
contact email	kristin.burnum-johnson@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000089938/