PXD035468
PXD035468 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | MSRefine: comprehensive evaluation of the data-dependent LC–MS/MS workflow |
| Description | There are four datasets in this paper, representing different sample types (plasma and tissue), different sample loading amounts, different chromatographic conditions and different mass spectrometers. |
| HostingRepository | iProX |
| AnnounceDate | 2023-04-19 |
| AnnouncementXML | Submission_2023-12-06_20:13:40.244.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Min Tang |
| SpeciesList | scientific name: Homo sapiens; NCBI TaxID: 9606; scientific name: Saccharomyces cerevisiae; NCBI TaxID: 4932; scientific name: Rattus rattus; NCBI TaxID: 10117; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Q Exactive HF-X; Orbitrap Fusion; Orbitrap Fusion Lumos; timsTOF Pro; Q Exactive HF |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2022-07-20 21:23:24 | ID requested | |
| 1 | 2022-07-20 21:23:39 | announced | |
| ⏵ 2 | 2023-12-06 20:13:41 | announced | 2023-12-07: Update publication. |
Publication List
| Tang M, Huang P, Wu L, Zhou P, Gong P, Liu X, Wei Q, Hou X, Hu H, Zhang A, Shen C, Gao W, Tian R, Liu C, Comprehensive Evaluation and Optimization of the Data-Dependent LC-MS/MS Workflow for Deep Proteome Profiling. Anal Chem, 95(20):7897-7905(2023) [pubmed] |
Keyword List
| submitter keyword: MSRefine, DDA, LC–MS/MS |
Contact List
| Chao Liu | |
|---|---|
| contact affiliation | Beihang University |
| contact email | liuchaobuaa@buaa.edu.cn |
| lab head | |
| Min Tang | |
| contact affiliation | Beihang University |
| contact email | tangmin@buaa.edu.cn |
| dataset submitter | |
Full Dataset Link List
| iProX dataset URI |
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