PXD035233

PXD035233 is an original dataset announced via ProteomeXchange.

Title	Surface stiffness, hydration, polydimethylsiloxane (PDMS), hyaluronic acid, biofilm and bacterial mobility, protein patterns.
Description	By a global proteomic approach and phenotypic assays, we investigated the impact of surface stiffness on E. coli biofilm formation capacity. A global proteomic approach was used in order to identify the most abundant proteins for the comparison between E. coli adhesion in PDMS 9 kPa and 574kPa, (polydimethylsiloxane,), and between HA 44Pa and 2kPa (hyaluronic acid gels).
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:38:04.022.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Julie Hardouin
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2022-07-11 08:21:19	ID requested
1	2023-03-10 23:11:59	announced
⏵ 2	2023-11-14 08:38:04	announced	2023-11-14: Updated project metadata.

Vigu, é A, Vautier D, Kaytoue A, Senger B, Arntz Y, Ball V, Ben Mlouka A, Gribova V, Hajjar-Garreau S, Hardouin J, Jouenne T, Lavalle P, Ploux L, Biofilm Formation, Motion and Protein Patterns on Hyaluronic Acid and Polydimethylsiloxane Depend on Surface Stiffness. J Funct Biomater, 13(4):(2022) [pubmed]

submitter keyword: motion and protein patterns on hyaluronic acid and polydimethylsiloxane depend on surface stiffnes,Escherichia coli biofilm formation

Julie Hardouin
contact affiliation	Normandie University, UNIROUEN, INSA Rouen, CNRS, Polymers, Biopolymers, Surfaces Laboratory, Rouen, France, PISSARO Proteomic Facility, IRIB, Mont-Saint-Aignan, France
contact email	julie.hardouin@univ-rouen.fr
lab head
Julie Hardouin
contact affiliation	Université de Rouen - laboratoire PBS
contact email	julie.hardouin@univ-rouen.fr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD035233

PRIDE project URI

• PRIDE
  1. PXD035233
     1. Label: PRIDE project
     2. Name: Surface stiffness, hydration, polydimethylsiloxane (PDMS), hyaluronic acid, biofilm and bacterial mobility, protein patterns.