PXD035158 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Glycoproteomic analysis of Fut8 knock out/wild type mouse brain, Human IgG and Human Serum. |
Description | In this study, we provide a simple and straightforward method to distinguish core-fucosylated glycans from antenna-fucosylated glycans by systematically evaluating the extent of fucose migration based on the feature Y ions by using Fut8 knockout (Fut8−/−) mouse brain under HCD energy of 20%. The method was further evaluated by multiple different approaches including validation by standard glycopeptides, evaluation in silico, comparison under the lower energy (15%), and applied to analyze core-fucosylated glycans in wide-type (Fut8+/+) mouse brain. |
HostingRepository | PRIDE |
AnnounceDate | 2022-11-14 |
AnnouncementXML | Submission_2022-11-14_04:08:05.135.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | ZexuanChen |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | carbamoylated residue; monohydroxylated residue |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-07-07 01:18:52 | ID requested | |
⏵ 1 | 2022-11-14 04:08:05 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project, Glycoproteomics (B/D-HPP) |
submitter keyword: Fut8,Glycoproteomics, Human IgG, Human serum, mouse brain, LC-MS/MS |
Contact List
ShishengSun |
contact affiliation | Northwest University |
contact email | suns@nwu.edu.cn |
lab head | |
ZexuanChen |
contact affiliation | Northwest Uinversity |
contact email | zexuanchencn@163.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD035158
- Label: PRIDE project
- Name: Glycoproteomic analysis of Fut8 knock out/wild type mouse brain, Human IgG and Human Serum.