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PXD034979

PXD034979 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleMicrobiota biobanking using ice recrystalization inhibitor
DescriptionThis study use different ice recrystalization inhibitors (IRIs) for better storing live microbiota. We evaluated whether the addition of IRIs can improve the cultivibility of microbiome and maintain their resposnes to prebiotic kestose. Frozen or fresh microbiota were cultured with or without kestose for 24 hours, and microbiota samples were collected for metaproteomics analysis.
HostingRepositoryPRIDE
AnnounceDate2023-11-14
AnnouncementXMLSubmission_2023-11-14_08:27:33.879.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterXu Zhang
SpeciesList scientific name: human feces metagenome; NCBI TaxID: 2705415;
ModificationListNo PTMs are included in the dataset
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02022-06-30 02:49:37ID requested
12023-02-07 08:51:44announced
22023-11-14 08:27:34announced2023-11-14: Updated project metadata.
Publication List
Creskey M, Li L, Ning Z, Fekete EE, Mayne J, Walker K, Ampaw A, Ben R, Zhang X, Figeys D, An economic and robust TMT labeling approach for high throughput proteomic and metaproteomic analysis. Proteomics, 23(21-22):e2200116(2023) [pubmed]
Keyword List
submitter keyword: microbiome, biobanking, metaproteomics
Contact List
Xu Zhang
contact affiliationRegulatory research division, BRDD, Health Canada
contact emailxu.zhang@hc-sc.gc.ca
lab head
Xu Zhang
contact affiliationUniversity of Ottawa
contact emailcheuzhang@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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