PXD034931 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | The small proteome of the nitrogen-fixing plant symbiont Sinorhizobium meliloti |
Description | The Alphaproteobacterium Sinorhizobium meliloti lives in soil and is capable of fixing molecular nitrogen in symbiosis with legume plants. In this work, the small proteome of S. meliloti strain 2011 was studied to uncover translation of both annotated and novel small open reading frame (sORF)-encoded proteins (SEPs). |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_08:56:21.250.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Sandra Maass |
SpeciesList | scientific name: Sinorhizobium meliloti 2011; NCBI TaxID: 1286640; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-06-27 01:24:55 | ID requested | |
1 | 2023-03-13 03:09:35 | announced | |
⏵ 2 | 2023-11-14 08:56:22 | announced | 2023-11-14: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: rhizobia, proteomics, proteogenomics, sORF, small proteins,Ribosome profiling |
Contact List
Dörte Becher |
contact affiliation | Institute of Microbiology, University of Greifswald, 17489 Greifswald, Germany |
contact email | dbecher@uni-greifswald.de |
lab head | |
Sandra Maass |
contact affiliation | University of Greifswald, Department for Microbial Proteomics |
contact email | sandra.maass@uni-greifswald.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD034931 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD034931
- Label: PRIDE project
- Name: The small proteome of the nitrogen-fixing plant symbiont Sinorhizobium meliloti